Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826212.1_cds_XP_016502580.1_16205
CDS Infomation

[gene=LOC107820754] [db_xref=GeneID:107820754] [protein=CDT1-like protein a, chloroplastic] [protein_id=XP_016502580.1] [location=join(1593..1705,1794..2028,2901..3557,3813..4014,4109..4199,4370..4481)] [gbkey=CDS]
Sequence

ATGTTGGAAAAGTTCTTCAACAGCATGTATAGTTCAATTCGGCTGCTGCATTTGAAGGGT
TCTGCAACAACTTTCACTAATATTAGTGCCAAAGTTCAGAATTTGACTGATAAGAGGTTT
TCTTACAGCCATTTAGCTCAGCTGAAGTTTATTTTACCTGAAGCAATTGAGATACAGAAG
ATTCTCAAGCATGATGAGCTCACTTGCTGTATGAAGCCAGATCTTTATGTAACTTTAAAT
GCCAATGCAATTGAGGGTAGTGAGAAGTGGAAATCTAACACTAGCAGTGTTCTGTTAAGG
AAAGTTTTCCGCTCTCGGCTCTTGGATTTCTTCAAGTCCCACCCTGGGGGTGATGACATT
CCTGAGGAAACGCTGCCTGGGCCATTCTCACAGTCTAAGCAACCAGTGACCAACTCGTCT
AGACCTTCTGTCTCGTCCTTAGCCAATGAGACACCTGATGGTGCATTTTTGCTGCAGTCA
GTAGCTGCATCACACCTGTCTGGCTCTTTTAGAAGATGCTTTTCAAAACAGGCATGTATT
ACTGGAGGAAATGCCAAGGAAGAAGATAGAGCTGGGCTTGTGCCAGTTTCAATACCCCTC
AAAGTCGAAAGTTCCACTAAGAAGAAAACAGTAGCATGTGCTGATGCTCCTAAGTTATGT
TCAAAACAAACTAATATGAAATATTCATCAGGAGGGATTGTTTCGGCTAGTTCACCATCA
TGTCATCCACCTGCAACTCCGATGATCGAAGCCAAAAAGGGAGAGAATGGTTCTATGTCA
GCTCCAGCTACCCCTTTGCTTGAACCTCCTAATAGATGTTACATGAGTCCAGACGATGAT
CCAGGTGAATCACCAATAAAACTAGCTAGACACTCATCGACTAGAAGGTCATTGTTCTTC
GACACTCCTGTGCGGAATGCAAATGCTGCTGATCAAGTCCGTGAGAGTGAAAGGTTTTCA
ACCGATGATATTTTAGACATTCTTCCCGAGAATCTTCTGAACTCGATGGGAGAAAAAGAG
AGCAAGGCACTAGAGCAGCAAGACCCAGCCATATCTCAGGCAAAAAGGCGCAAACAGATG
ATTGCGTGTTTGCCTCGCCTCTTTGACATGATTTATTTCCTATTTCAATCTATTAAGCGT
TCTGTCATGACGAAAGAAGAGCTCATGCACAGACTAATTTCCAAACAGACGGAGCTTGCT
GATAAAAGAGAAGTTGAAGAGCAACTTATATTACTGCAAAAACTAGCTCCTGAATGGATT
TATGAGAAACCAACATCTAGTGGAGTTCTCCTCTTATGTGTTAACAAGATATCAAATCCT
GACACAATTCGATCAAGACTGGCCGAAGCCAAGTTAGAGAAGCAAGAAAATGGTGATGGT
ACGATATTTTACCAACTTAGCAAGGAATGA

Peptide Sequence

PEP ID

XP_016502580.1
PEP Infomation

PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana tabacum]
Sequence

MLEKFFNSMYSSIRLLHLKGSATTFTNISAKVQNLTDKRFSYSHLAQLKFILPEAIEIQK
ILKHDELTCCMKPDLYVTLNANAIEGSEKWKSNTSSVLLRKVFRSRLLDFFKSHPGGDDI
PEETLPGPFSQSKQPVTNSSRPSVSSLANETPDGAFLLQSVAASHLSGSFRRCFSKQACI
TGGNAKEEDRAGLVPVSIPLKVESSTKKKTVACADAPKLCSKQTNMKYSSGGIVSASSPS
CHPPATPMIEAKKGENGSMSAPATPLLEPPNRCYMSPDDDPGESPIKLARHSSTRRSLFF
DTPVRNANAADQVRESERFSTDDILDILPENLLNSMGEKESKALEQQDPAISQAKRRKQM
IACLPRLFDMIYFLFQSIKRSVMTKEELMHRLISKQTELADKREVEEQLILLQKLAPEWI
YEKPTSSGVLLLCVNKISNPDTIRSRLAEAKLEKQENGDGTIFYQLSKE

Transcript Sequence

Gene sequence data has not been registered.